PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015890959.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family Dof
Protein Properties Length: 252aa    MW: 26845.3 Da    PI: 8.4463
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015890959.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof39.98.7e-135293862
          zf-Dof 38 ryWtkGGalrnvPvGggrrknkkss 62
                    ryWt+GG+lrnvPvGgg+rk k+++
  XP_015890959.1  5 RYWTQGGTLRNVPVGGGCRKGKRAK 29
                    9*******************99875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074783.0E-6527IPR003851Zinc finger, Dof-type
PfamPF027014.3E-8527IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MPSLRYWTQG GTLRNVPVGG GCRKGKRAKT STSGQNSRSQ AQPEPPLPPQ QPSQQVQQNM  60
ANPPAIISSG SVMTTTPAMR TIEPGALPSQ YYPGSGYLSS LAAIHSLNQS QPFDQALDVG  120
TDQLAGNNSS NMSLLQGFSV SSFGSQQQQQ HQIQPSQTHF YQTAGNRDKS INESLYQSEE  180
NLIQTAAGRS TSSSSPHEWP HNFMNTSGAT TASSESALWT MGNTKATANT TSAGSSFNPN  240
QWPDLPGYGP PP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015890959.10.0PREDICTED: dof zinc finger protein DOF4.4-like isoform X2
TrEMBLA0A0D2UNM92e-54A0A0D2UNM9_G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.13e-10Dof family protein